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Allocation of shifts to edges

Source: R/shifts_manipulations.R
allocate_shifts_from_regimes.Rd

allocate_shifts_from_regimes returns the position of the shifts induced by the allocation of the regimes. Only works in an "infinite site" model.

Usage

allocate_shifts_from_regimes(phylo, regimes)

Arguments

phylo

a phylogenetic tree, class phylo.

regimes

: vector of size (ntaxa + Nnode) of the regimes of each node and tip.

Value

Vector of edges numbers where the shifts are.